Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDHPYHVAITATAARDLQRLPEKIAAACVEF-VFGPLLNNPHRLGKPLRNDLEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
3G5O Chain:B ((16-96))
----VPYTVRFTTTARRDLHKLPPRILAAVVEFAFG-DLSREPLRVGKPLRRELAGTFSARRGTYRLLYRIDDEHTTVVILRVDHR------------
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57321 for 536 contacts (-106.9/contact) +
2D Compatibility (PS) -8975 + (NN) -5323 + (LL) 240
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -81479.0 ( -152.01 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: