Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAAGDAAIGRESRELMSAADVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGHRELPLRADYVGKNVPTSRSESVHVRLREHDGRDGVVISR
1XZN Chain:A ((6-176))
---------------VMDEQAIRRALTRIAHEIIERNK-----GIDG--CVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYR---------------VPFP-VTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSI--
General information:
TITO was launched using:
RESULT:
Template:
1XZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133358 for 1215 contacts (-109.8/contact) +
2D Compatibility (PS) -16691 + (NN) -7103 + (LL) 1208
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -179244.0 ( -147.53 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1XZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZN-query.scw
PDB file :
Tito_Scwrl_1XZN.pdb
: