Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWS----LNGMGALAAALVWHLST |
| 3TBG Chain:A ((34-72)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YCFDQLRRRFGDVFS-LQLAWTPVVVLNGLAAVREALVTH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12665 for 151 contacts (-83.9/contact) +
2D Compatibility (PS) -3651 + (NN) 1206 + (LL) 18704
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -2006.0 ( -13.28 by residue)
QMean score : -0.061
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