Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIQNSSARRRSAGRIVYAAGAVLWRPGSADSEGPVEIAVIHRPRYDDWSLPKGKVDPGETAPVGAVREILEETGHRANLGRRLLTVTYPTD--SPFRGVKKVHYWAARSTG-----------GEFTPGSEVDELIWLPVPDAMNKLDYAQDRKVLCRFAKHPADTQTVLVVRHGTAGSKAHFSGDDSKRPLDKRGRAQAEALVPQLLAFGATDVYAADRVRCHQTMEPLAAELNVTIHNEPTLTEESYANNPKRGRHRVLQIVEQVGTPVICTQGKVIPDLITWWCERDGVHPDKSRNRKGSTWVLSLSAGRLVTADHIGGALAANVRA |
| 1VC9 Chain:A ((17-123)) | ---------------------------------------LLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEQTGVRAE----VLLPLYPTRYVNPKGVEREVHWFLMRGEGAPRLEEGMTGAGWFSP-EEARAL--LAFPEDLGLLEVALER--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VC9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12599 for 595 contacts (-21.2/contact) +
2D Compatibility (PS) -9758 + (NN) -3 + (LL) 14060
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -16150.0 ( -27.14 by residue)
QMean score : 0.483
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