Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTLTLEPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPVLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGG--TQDAVMKRGFG-DNRDGSIMRDGMPSVQGRNFTATA-------DHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDYWRDFGKSRETLVAPSLAWYGEDTT--VNLSYEHREFTTPFDRGTAIDPRTNRPLDIPRSRRLDEPFN-----ITEGRSE-LTRLDLERQLDDTWKAH---------------FGYGYSRE---TYDDNQARVMAVNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQ----LAGMQHDLQFGMDHEK-RKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQT-------------DKLRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYMRSFKPNSTIAPLSTGETIDSAIL-PEEATSWELGAKL---DVPGRLSGTLALFDIRKKNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNTASLSAVYEL--GQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYD-TRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF |
| 4CU4 Chain:A ((1-706)) | ------------------------------------------------------------------------------------------------------------------------SAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVS-VGTRGASNTYDHLIIRGFAAEGQSQNNYLNGL-KLQG-NFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDD---DGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY-YGWLPKEGTVEPL--PNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKY-----VVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYN-------------NTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGG-RYDWADQES-LNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGK-------DGNIFAPSKGKQYEVGVKYVPEDRPIVVTG--AVYNLTKTNNLMADPEGSFFSV--EGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSG---LTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 126181 for 5272 contacts (23.9/contact) +
2D Compatibility (PS) -65274 + (NN) -10827 + (LL) 10916
1D Compatibility (HY) -33200 + (ID) 9850
Total energy: 17946.0 ( 3.40 by residue)
QMean score : 0.157
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