Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLFERLDPAR-----FGDPAQFVPGTFSECGVAT--YVW-SMVMAYDSTKLARAPQSWADFWNVR---EFPGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWP--GSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
| 4GL0 Chain:A ((10-291)) | -----------------------------SNTLTIYNWGDYI----DPSLITKFEKETGIKVIYQTFDSNEAMM-TKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDP-RFMDLSFDDDNKYSMPYFWGTLGIIYNKEMF---PDKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKA-----HLQAARDKLETMTPNVKAI-VGDEIKLLMADN-AGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66430 for 2143 contacts (-31.0/contact) +
2D Compatibility (PS) -29514 + (NN) -18728 + (LL) 4520
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -125702.0 ( -58.66 by residue)
QMean score : 0.385
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