Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVAD--PQGQAFAADTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKK--PDSYFEVAWR--REPGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIRGLPNE--DNIALLLRFANGALGSL---------------TGCDAAAAPWSWELAAGE--NPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYAEARQGWHDPLA-ASEEAVAT-GDPLQRQL-----EHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3E18 Chain:A ((7-348)) | -----QLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFHLESRVHGANGIPGD-----WRHLKAHGGGMVLDWGVHLLDQLLFLVD--SNVKSVSANLSFALGDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDL-SGEIVKPTALAKTSEPTPIKAG-------------------QGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFVDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTVHS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182611 for 2332 contacts (-78.3/contact) +
2D Compatibility (PS) -33326 + (NN) -10196 + (LL) 3212
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -244221.0 ( -104.73 by residue)
QMean score : 0.488
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