Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALARHKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGAALTREKIVAAVAKTFICIADASKLVPILGQ-FPLPVEVIPMARSHVARQLVKLGGDPVYREGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGVKTLKA
1M0S Chain:A ((1-218))
MNQLEMKKLAAQAA----LQYVKADRIVGVGSGSTVNCFIEALGTIKDKIQGAVAASKESEELLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPLPVEVIPMARSQVGRKLAALGGSPEYREGVVTDNGNVILDVHNFSILNPVEIEKELNNVAGVVTNGIFALRGADVVIVGTPEGAKVID-
General information:
TITO was launched using:
RESULT:
Template:
1M0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135648 for 1945 contacts (-69.7/contact) +
2D Compatibility (PS) -23634 + (NN) -8942 + (LL) 428
1D Compatibility (HY) -23200 + (ID) 6450
Total energy: -197446.0 ( -101.51 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1M0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M0S-query.scw
PDB file :
Tito_Scwrl_1M0S.pdb
: