Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLSGWITTQVPPSSRAAADAKAARTGTAEQAEDPAAGTDAADQHVQ-----LSQAGRELAATMGVPVEEEDEDI----PQELRPMVKMIR-----ELKKKIEEKLRELQEAMRSSDPGAKEARVPELQKELQQLNSALQTATAAMASAIKEMGISDPALIMKVMGSR |
1YQY Chain:A ((19-91)) | --------------------------------------------QHYQHWSDSLSEEGRGLLKKLQIPIEPKKDDIIHSLSQEEKELLKRIQIDSSDFLSTEEKEFLKKLQIDIRDSLSEEEKELLNRIQVDSSNPLSEKEKEFLKKLKLDIQPYDINQRLQDTGGLID |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2490 for 244 contacts (10.2/contact) +
2D Compatibility (PS) -6528 + (NN) -4371 + (LL) 2540
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -11419.0 ( -46.80 by residue)
QMean score : 0.551
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