Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAEKTPDNVVILNHDPIVDPLRQGLLLLCRQLGRPLGDAELVDGMPLEHGRLPLHLVARALRRADITAQVTRQPLRRIDRYLLPALLLLDDGRALVLVGNDGEHAEVLVPQSDGGSQRMPLAELEALYSGTAVFAKCRYRPDGRVGDYASALPEHWFFGPLKRLWRSYAEVTAAALVANVLAVASALFAMQVYDRVVPNAAFDTL--WILASGVALAIVLDGVLRIMRGHLLNVLGKRLDLQLSTLLFSRVLSTRVAA--KPASMGAFSTQVREFESVREFFTSSSAALISDLPFVAIFLLIIAVIGGHVVWVPLVACVLMILP-GLLTQRLLGHLSRQNLREG----AMKNGVLLEAFEHLETVKATRAEGRCLHQWETLTGELAGTAMKTHTLASTLSYSASIVQQLCYVGVVVFGVYRISEGAMTVGGLVACSILASRAIA-PLSQAAGILGRWQHTKVAMEGLDQLMSAEQERPQGKRFVHKERLQGHYRLEGVRLAHGDSPPVVDVQALNIRAGERVALLGGNGAGKSTLLRLLSGLLDAQAGRLLLDDVSLTQIDPADRQRGIGYLPQDVALFHGSLRDNLNLENAALGDEELLETLDGVGLGAFVRGHPLGLDMPIQGNAS-LSGGQRQAVGLARVLLQDPPILLLDEPTAAFDQGSEKQVIDYLQQWLGKRTLVITTHKKSMLALVERAVVLRQGRVIMDGPLEQVVQGNQVQAPQAAEGGNHGL |
4Q4J Chain:B ((48-578)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYA--LTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQF-----FSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGT-IATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDA-VELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATCNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQYG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277733 for 3731 contacts (-74.4/contact) +
2D Compatibility (PS) -54524 + (NN) -24102 + (LL) 12752
1D Compatibility (HY) -38000 + (ID) 6450
Total energy: -388057.0 ( -104.01 by residue)
QMean score : 0.383
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