Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDYIRDGQAIYRQSFATIRAEANLAGIPADLEKLAVRVIHACGMVDVVDDLRFSPGAGAAGRAALAAGAAILCDARMVAEGVTRSRLPAANRVICTLNEADVPALATELGNTRSAVALEHWREHLEGSVVVIGNAPTALFYLLEMLDAGAPKPALILGFPVGFVGAAESKEMLAADSRGVPYVIVRGRRGGSAMAAAAVNALATERE
1OU0 Chain:A ((36-202))
----------------------------------IVVKAIHAAGDFAIAPLIRYSDGFFKSMLAKLKEGCTIICDSEMVRAGIYSRPVLERNRVVCYLNDVRSKEMADVNGITRSAAGIRIAMQDHRNSVIVIGNAPTALLEAMRMIEENGWYDIPIVGIPVGFINASKAKEGLV--SSHIEYISVEGHRGGSPIAASIVNGF-----
General information:
TITO was launched using:
RESULT:
Template:
1OU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43400 for 1374 contacts (-31.6/contact) +
2D Compatibility (PS) -15186 + (NN) 11916 + (LL) 3416
1D Compatibility (HY) 6400 + (ID) 650
Total energy: -37504.0 ( -27.30 by residue)
QMean score : -0.058
(partial model without unconserved sides chains):
PDB file :
Tito_1OU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OU0-query.scw
PDB file :
Tito_Scwrl_1OU0.pdb
: