Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEPR--ALNELFPDWKELGAPLNTPVTGDDIYVLKSAESATKVPNFFVPKTMHNEGNYIISLGNLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTPGMELRAKYTLFAEGCRGHIGKQLIKKYNL-DSEADAQHYGIGIKEIWDIDPSKHKPGLVVHTAGWPLNDENTGGSFLYHLE--NNQVFVGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYLEGGKRVAYGARAICKGGL-----NSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADAIAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIFGGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM |
| 4OPG Chain:A ((5-323)) | -----LKYDVLIIGGGFAGSSAAYQLSRR----GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPK----GEELENKINGIKLY----------SPDMQTVWTVNGEG-FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVL----FNRRTNEELTVYS---KVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKE-DIEDHDYLRIFI--------DQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSI-----------HEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108043 for 2634 contacts (-41.0/contact) +
2D Compatibility (PS) -32658 + (NN) -5875 + (LL) 11176
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -156350.0 ( -59.36 by residue)
QMean score : 0.371
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