Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRLSLPAPAKLNLFLHILGRRDDGYHELQTLFQFLDHGDELHFEARQDGQVRLHTEIAGVPHDSNLIVRAARGLQEASGSPQGVDIWLDKRLPMGGGIGGGSSDAATTLLALNHLWQLGWDEDRIAALGLRLGADVPVFTRGRAAFAEGVGEKLTPVDIPEPWYL-VVVPQVLVSTAEIFS----DPLLTRDSPAIKVRTVLEGDS---RNDCQPVVERRYPEVRNALILLNKFVSAR--LTGTGGCVFGSFPNKAEADKVSALLPDHLQRFVAKGSNISMLHRKLETLV |
| 2VF3 Chain:A ((9-246)) | --------SPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYI---REGVLRVETNI-GIPQEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYAEEKIQRIISGEVEEIENVLGDIARELYPEI-NEVYRFVEYLGFKPFVSGSGSTVY----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109378 for 1833 contacts (-59.7/contact) +
2D Compatibility (PS) -24951 + (NN) -6878 + (LL) 4008
1D Compatibility (HY) -18400 + (ID) 3700
Total energy: -159299.0 ( -86.91 by residue)
QMean score : 0.380
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