Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLNLLRERYRVDLASLQATCEANYARLMRLLPDMREAQASRRVALSEGERLLGVLALEVTEACPYTTTLQVRQELGLPWLPAPRLEVRVYHDARMAEVIGAEQARRLMAIYPYPNQAMHQPDEKNQLNLFLGEWLA------HCLACGHEMEPVAQR |
1NYC Chain:A ((20-49)) | -------------------------------------------------------------------------------------------------------------------------HLEQTNINLFIGNWSNHQLQKSICIRHGDD------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5584 for 82 contacts (-68.1/contact) +
2D Compatibility (PS) -2479 + (NN) 340 + (LL) 11828
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 1705.0 ( 20.79 by residue)
QMean score : 0.299
|
|
|