Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3IN8 Chain:A ((3-103))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVP--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61033 for 682 contacts (-89.5/contact) +
2D Compatibility (PS) -10978 + (NN) -7598 + (LL) 5740
1D Compatibility (HY) -14000 + (ID) 5050
Total energy: -92919.0 ( -136.24 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_3IN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IN8-query.scw
PDB file :
Tito_Scwrl_3IN8.pdb
: