Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2H7V Chain:A ((5-182))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC-------------
General information:
TITO was launched using:
RESULT:
Template:
2H7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144864 for 1442 contacts (-100.5/contact) +
2D Compatibility (PS) -19102 + (NN) -9182 + (LL) 584
1D Compatibility (HY) -24000 + (ID) 6350
Total energy: -202914.0 ( -140.72 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_2H7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H7V-query.scw
PDB file :
Tito_Scwrl_2H7V.pdb
: