Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4L9W Chain:A ((6-171))
MTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4L9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97157 for 1371 contacts (-70.9/contact) +
2D Compatibility (PS) -18289 + (NN) -6254 + (LL) 1972
1D Compatibility (HY) -22800 + (ID) 7750
Total energy: -150278.0 ( -109.61 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4L9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L9W-query.scw
PDB file :
Tito_Scwrl_4L9W.pdb
: