Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
4NX5 Chain:A ((7-226))
------DVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLL--
General information:
TITO was launched using:
RESULT:
Template:
4NX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187292 for 1925 contacts (-97.3/contact) +
2D Compatibility (PS) -23651 + (NN) -6017 + (LL) 452
1D Compatibility (HY) -32000 + (ID) 10950
Total energy: -259458.0 ( -134.78 by residue)
QMean score : 0.843
(partial model without unconserved sides chains):
PDB file :
Tito_4NX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NX5-query.scw
PDB file :
Tito_Scwrl_4NX5.pdb
: