Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERPQLDSMSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTEEHKDQSPSQTEFLRQRPASLVQDTTSAETPRGKSQISTSSSQTPLLRWVLTLSFLLATVAVGIYAM
1ULX Chain:A ((11-222))
----------QDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLT-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ULX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94794 for 1681 contacts (-56.4/contact) +
2D Compatibility (PS) -23321 + (NN) -19935 + (LL) 5456
1D Compatibility (HY) -28000 + (ID) 10600
Total energy: -171194.0 ( -101.84 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1ULX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ULX-query.scw
PDB file :
Tito_Scwrl_1ULX.pdb
: