Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAAGRLFLSRLRAPFSSMAKSPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGTQKACTAQSLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKNL
2ZI4 Chain:A ((39-279))
------------------------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQS----------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKD---KYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124740 for 1764 contacts (-70.7/contact) +
2D Compatibility (PS) -23912 + (NN) -3885 + (LL) 3092
1D Compatibility (HY) -26000 + (ID) 6050
Total energy: -181495.0 ( -102.89 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI4-query.scw
PDB file :
Tito_Scwrl_2ZI4.pdb
: