Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPP--LFW--RHQ---GTSRDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
3SN6 Chain:R ((185-490))-------------------------MGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR--QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEA-----KRQLQKIDKSEGR--------------------------------------------CLK--------------EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNL-IRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC---


General information:
TITO was launched using:
RESULT:

Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -235995 for 1996 contacts (-118.2/contact) +
2D Compatibility (PS) -27301 + (NN) -140 + (LL) 5588
1D Compatibility (HY) -31200 + (ID) 5150
Total energy: -294198.0 ( -147.39 by residue)
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_3SN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SN6-query.scw
PDB file : Tito_Scwrl_3SN6.pdb: