Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHIINSYENINNTARNNSDCPRVVLPEEIFFTISIVGVLENLIVLLAVFKNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDSLFVLSLL-GSIFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLTVIWTFC------------------TGTGITMVIFSHHVP-TVITFTSLFPLMLV---FILCLYVHMFLLARSHTRKISTLP----------RANMKGAITLTILLGVFIFCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSPELRDAFKKMIFCSRYW |
3RFM Chain:A ((15-303)) | --------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITI---------STGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAI--VLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237467 for 1848 contacts (-128.5/contact) +
2D Compatibility (PS) -25166 + (NN) -9494 + (LL) 2696
1D Compatibility (HY) -29600 + (ID) 4050
Total energy: -303081.0 ( -164.00 by residue)
QMean score : 0.315
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