Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNSTLATTSKNITSGLHFGLVNISGNNESTLNCSQKPSDKHLDAIPILYYIIFVIGFLVNIVVVTLFCCQKGPKKVSSIYIFNLAVADLLLLATLPLWATYYSYRYDWLFGPVMCKVFGSFLTLNMFASIFFITCMSVDRYQSVIYPFLSQRRNPWQASYIVPLVWCMACLSSLPTFYFRDVRTIEYLGVNACIMAFP-PEKYAQWSAGIALMKNILGFIIPLIFIATCYFGIRKHL----LKTNSYGKNRITRDQVLKMAAAVVLAFIICWLPFHVLTFLDALAWMGVINSCEVIAVIDLALPFAILLGFTNSCVNPFLYCFVGNRFQQKLRSVFRVPITWLQGKRESMSCRKSSSLREMETFVS |
| 4EA3 Chain:A ((131-405)) | -------------------------------------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP------TSSKAQAVNVAIWALASVVGVPVAIMGSAQ-VEDEEIE-CLVEIPTPQDY--WGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLR-RITRLVLVVVAVFVGCWTPVQVFVLAQGL---GVQPSSETAVAI---LRFCTALGYVNSCLNPILYAFLDENFKACFR--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285004 for 2003 contacts (-142.3/contact) +
2D Compatibility (PS) -26725 + (NN) -2034 + (LL) 5844
1D Compatibility (HY) -25600 + (ID) 4550
Total energy: -338069.0 ( -168.78 by residue)
QMean score : 0.307
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