Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTI--WVLAAALCIPEILYSQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILG-FFLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLLETTSGALSL |
| 4XT3 Chain:A ((26-310)) | ------------------EDATPCV-------FTDVLNQSKPVTLF-------LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MRYRPVKQACL-------FSIFWWIFAVIIAIPHFMVVTKKDNQ----CMTDYDYLEVSY--PIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE----------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -254733 for 2048 contacts (-124.4/contact) +
2D Compatibility (PS) -28228 + (NN) -6793 + (LL) 5388
1D Compatibility (HY) -38800 + (ID) 4550
Total energy: -327716.0 ( -160.02 by residue)
QMean score : 0.219
|
|
|