Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVAPLRGALLLWQLLAAGGAALEIGRFDPERGRGAAPCQAVEIPMCRGIGYNLTRMPNLLGHTSQGEAAAELAEFAPLVQYGCHSHLRFFLCSLYAPMCTDQVSTPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDCARLPTRNDPHALCMEAPENATAGPAEPHKGLGMLPVAPRPARPPGDLGPGAGGSGTCE-------NPEKFQYVEKSRSCAPRCGPGVEVFWSRRDKDFALVWMAVWSALCFFSTAFTVLTFLLE-PHRFQYPERPIIFLSMCYNVYSLAFLIRAVAGAQ-SVACDQEAGALYVIQEGLENTGCTLVFLLLYYFGMASSLWWVVLTLTW---FLAAGKKWGHEAIEAHGSYFHMAAWGLPALKTIVILTLRKVAGDELTGLCYVASTDAAALTGFVLVPLSGYLVLGSSFLLTGFVALFHIRKIMKTGGTNTE----KLEKLMVKIGVFSILYTVPATCVIVCYVYERLNMDFWRLRATEQP-CAAAAGPGGRRDCSLPGGSV---PTVAVFMLKIFMSLVVGITSGVWVWSSKTFQTWQSLCYRKIAAGRARAKACRAPGSYGRGTHCHYKAPTVVLHMTKTDPSLENPTHL |
| 4JKV Chain:A ((110-466)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGQCEVPLVRTDNPKS--WYEDVEGCGIQCQN--PLFTEAEHQDMH-SYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTT--YQP--GKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKS--NHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQAN-------------CEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWC------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253292 for 2507 contacts (-101.0/contact) +
2D Compatibility (PS) -33049 + (NN) -13583 + (LL) 13096
1D Compatibility (HY) -30800 + (ID) 4750
Total energy: -322378.0 ( -128.59 by residue)
QMean score : 0.321
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