Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMAS--PVAYHQGLFHPRASNQTFCWEQWP---DPRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMSKKSEASKKKTAQTVL-----------VVVVVFGISWLPHHIIHLWAEFGVFPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 2Y03 Chain:A ((16-300)) | -------------------------------------LLMALVVLLIVAGNVLVIAAIGSTQ--RLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS-ALVSFLPIMMHW--WRDEDPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR-DLVP-DWLF-VAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217154 for 1875 contacts (-115.8/contact) +
2D Compatibility (PS) -26422 + (NN) -11161 + (LL) 3340
1D Compatibility (HY) -32400 + (ID) 4150
Total energy: -287947.0 ( -153.57 by residue)
QMean score : 0.253
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