Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQLGVVHWVSLVLYCLAFVLGIPGNAIVIWFTGFKWKKTVT---TLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQLNMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTVEFNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIG-YLFPLLTMSICYLCLIFKVKKRSILISSRHFWTILVVVVA----FVVCWTPYHLFSIWELT-----IHHNSYSHHVMQAGIPLSTGLAFLNSCLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ |
4XT3 Chain:A ((43-316)) | ---------------------------------------VTLFLYGVVFLFGSIGNFLVIF--TITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD--H---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIP--HFMVVTKKDNQCM-------TDYDYLEVSYPIILNVELMLGAFVIPLSVISYCY----YRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233280 for 1860 contacts (-125.4/contact) +
2D Compatibility (PS) -25995 + (NN) -5179 + (LL) 7820
1D Compatibility (HY) -34800 + (ID) 4100
Total energy: -295534.0 ( -158.89 by residue)
QMean score : 0.283
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