Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGTYNTCGSSDLTWPPAIKLGFYAYLGVLLVLGLLLNSLALWVFCCRMQQWTETRIYMTNLAVADLCLLCTLPFVLHSLRDTSDT-P----LCQLSQGIYLTNRYMSISLVTAIAVDRYVAVRHPLRARGLRSPRQAAAVCAVLWVLVIGSLVARWLLGI---QEGGFC----FRSTRHNFNSMA---FPLLGFYLPLAVVVFCSLKVVTALAQRPPTDVGQAEAT---RKAARMVWANLLVFVVCFLPLHVGLTVRLAVGWNACALLETIRR------ALYITSKLSDANCCLDAICYYYMAKEFQEASALAVAPSAKAHKSQDSLCVTLA |
| 4RWA Chain:A ((120-400)) | -----------------ALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPF--QSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVC-YGLMLL---------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIV-----WT---LVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206980 for 1818 contacts (-113.9/contact) +
2D Compatibility (PS) -25460 + (NN) -13128 + (LL) 2676
1D Compatibility (HY) -25200 + (ID) 3950
Total energy: -272042.0 ( -149.64 by residue)
QMean score : 0.284
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