Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAV----FCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWN------CLDGLTTCGVVYPLSKNHLVVLAIAFFMVFG-------IMLQLYAQICRIVCRHAQQIALQRHLLPASHYVAT-RKGI---ATLAVVLGAFAACWLP------FTVYCLLGDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSDV |
| 3RFM Chain:A ((44-299)) | -----------------------------------------------------------------------------FVVSLAAADILVGV-LAIPFAITISTGFCAACHGCLFIACFVLVLA-QSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMV-----YFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQP--LPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFC-PDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191529 for 1485 contacts (-129.0/contact) +
2D Compatibility (PS) -22546 + (NN) -6681 + (LL) 5984
1D Compatibility (HY) -22400 + (ID) 4050
Total energy: -241222.0 ( -162.44 by residue)
QMean score : 0.276
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