Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLRCRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMH-WPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFWKDQLAILLPVRLEMAVVLFVVPLIITSYCY-----SRLVWILGRGGSHRRQRRVAGLVAATLLNFLVCFGPYNVSHVVGYICG---ESPVWRIYVTLLSTL---NSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAEN |
| 4RWA Chain:A ((125-406)) | ----------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMK-TATNIYIFNLALADALATSTLPFQ--SAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMA----VTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL-------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238784 for 1953 contacts (-122.3/contact) +
2D Compatibility (PS) -26306 + (NN) -9579 + (LL) 3968
1D Compatibility (HY) -25600 + (ID) 3300
Total energy: -299601.0 ( -153.41 by residue)
QMean score : 0.282
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