Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACNSTSLEAYTYLLLNTSNASDSGSTQLPAPLRISLAIVMLLMTVVGFLGNTVVCIIVYQRPAMRSAINLLLATLAFSDIMLSLCCMPFTAVTLITVRWHFGDHFCRLSATLYWFFVLEGVAILLIISVDRFLIIV---QRQDKLNPRRAKVIIAVSWVLSFCIAG-PSLTGWTLVEVPARAPQCVL--GYTELPADRAYVVTLVVAVFFAPFGVMLCAYMCILNTVRKNAVRVHNQSDSLDLRQLTRAGLRRLQRQQQVSVDLSFKTKAFTTILILFVGFSLCWLPHSVYSLLSVFSQRFYCGSSFYATSTCVLWLSYLKSVFNPIVYCWRIKKFREACIELLPQTFQILPKVPERIRRRIQPSTVYVCNENQSAV |
| 2VT4 Chain:A ((10-298)) | ----------------------------WEAGMSLLMALVVLLIVA----GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFV-----------ALRVYREAKE-QIR----------------------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFN----WLGYANSAMNPIIYC-RSPDFRKA--------FKRLLA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260470 for 2002 contacts (-130.1/contact) +
2D Compatibility (PS) -26785 + (NN) -1823 + (LL) 8356
1D Compatibility (HY) -30800 + (ID) 4200
Total energy: -315722.0 ( -157.70 by residue)
QMean score : 0.305
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