Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQ--HMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFIV--------YSES--KMVIVCLIT-----------MFFA----MMLLMGTLYVHMFLFARLHVKRIAALP-PADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIIT-----CPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG |
| 3RFM Chain:A ((12-303)) | -------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGV--------LAIPFA--ITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLP--LHIINCFTFFCPDCSHAPLWLMYLA-----IVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295686 for 1888 contacts (-156.6/contact) +
2D Compatibility (PS) -25440 + (NN) -5809 + (LL) 3380
1D Compatibility (HY) -29200 + (ID) 4500
Total energy: -357255.0 ( -189.22 by residue)
QMean score : 0.380
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