Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVR--HIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFC-----------------TGCG--IVFILYSESTYVILCLISMFFA----MLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQ----GAVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMC--NSVMDPLIYAFRSQEMRKTFKEIICCRGFRIACSFPRRD |
| 3RFM Chain:A ((7-303)) | ------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITI----------STGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQP-LPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWL----MYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269197 for 1894 contacts (-142.1/contact) +
2D Compatibility (PS) -26751 + (NN) -8228 + (LL) 2684
1D Compatibility (HY) -31600 + (ID) 4450
Total energy: -337542.0 ( -178.22 by residue)
QMean score : 0.429
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