Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLT-LAAVLPNLRAGTLQYDPRIYSCTFAQS-----VSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRV-KPDRKPKLKP------QDFRNFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV |
| 2Y03 Chain:A ((12-299)) | ---------------------------AGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVY---REAKEQIR----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR----DLVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLA--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275179 for 1968 contacts (-139.8/contact) +
2D Compatibility (PS) -26890 + (NN) -5457 + (LL) 3936
1D Compatibility (HY) -29200 + (ID) 3650
Total energy: -336440.0 ( -170.96 by residue)
QMean score : 0.323
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