Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHFLSQNDLNINLIPHLCLHRHSVIAGAFTIHRHMKIFNSPSNSSTFTGFILLGFPCPREGQILLFVLFTVVYLLTLMGNGSIICAVHWDQRLHAPMYILLANFSFLEICYVTSTVPSMLANFLSDTKIISFSGCFLQFYFFFSLGSTECFFLAVMAFDRYLAICRPLRYPTIMTRRLCTNLVVNCWVLGFIWFLIPIVNISQMSFCGSRIIDHFLCDPAPLLTLTCKKGP-----VIELVFSVLSP-----LPVFMLFLFIVGSYALVVRAVLRVPSAAGRR--------KAFSTCGSHLAVVSLFYGS-VLVMYGSPPSKNEAGKQKTVTL-FYSVVTPLLNPVIYSLRNKDMRKALKKFWGT
2YCX Chain:A ((16-294))------------------------------------------------------------------LLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK-----


General information:
TITO was launched using:
RESULT:

Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -210974 for 1834 contacts (-115.0/contact) +
2D Compatibility (PS) -25546 + (NN) -3979 + (LL) 5660
1D Compatibility (HY) -24400 + (ID) 3250
Total energy: -262489.0 ( -143.12 by residue)
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_2YCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCX-query.scw
PDB file : Tito_Scwrl_2YCX.pdb: