Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCPLTLQVTGLMNVSEPNSSFAFVNEFILQGFSCEWTIQIFLFSLFTTTYALTITGNGAIAFVLWCDRRLHTPMYMFLGNFSFLEIWYVSSTVPKMLVNFLSEKKNISFA--------GCFLQFYFFFSLGTSECLLLTVMAFDQYLAICRPLLYPNIMTGHLYAKLVILCWVCGFLWFLIPIVLISQMPFCGPNIIDHVVCDPGPRFAL--DCVSAPRIQLF----CYTLSSLVIFGNFLFIIGSYTLVLKAMLGMPSSTGRHKAFSTCGSH----LAVV----SLCYSSLMVM----YVSPGLGHSTGMQKIETLFYAMVTPLFNPLIYSLQNKEIKAALRKVLGSSNII |
| 4UHR Chain:A ((19-305)) | ---------------------------------------------------LAILGNVLVCWAVWLNSNLQNVTNYFV----------VSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203171 for 1866 contacts (-108.9/contact) +
2D Compatibility (PS) -26267 + (NN) -11387 + (LL) 4916
1D Compatibility (HY) -26800 + (ID) 3350
Total energy: -266059.0 ( -142.58 by residue)
QMean score : 0.227
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