Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNQTQMMEFLLVRFTENWVLLRLHALLFSLIYLTAVLMNLVIILLMILDHRLHMAMYFFLRHLSFLDLCLISATVPKSILNSVASTDSISFLGCVLQLFLVVLLAGSEIGILTAMSYDRYAAICCPLHCEAVMSRGLCVQLMALSWLNRGALGLLYTAGTFSLNFYGSDELHQFFC-DVPALLKLTCSKEHAIISVSVAIGVCYAFSCLVCIVVSYVYIFSAVLRISQRQRQSKAFSNCV----PHLIVVTVFLVTG--AVAYLKPGSDAPSILDLLVSVFYSVAPP---------------TLNPVIYCLKNKDIKSALSKVLWNVRSSGVMKR |
| 2Y00 Chain:A ((15-299)) | -------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVW----AISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIIS----FYIPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWL------PFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239855 for 1784 contacts (-134.4/contact) +
2D Compatibility (PS) -25703 + (NN) -10676 + (LL) 4892
1D Compatibility (HY) -20000 + (ID) 3150
Total energy: -294492.0 ( -165.07 by residue)
QMean score : 0.267
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