Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLGLALTTMPTVLGVLWLDHREIGSAA----CFSQAYFIHSLSFLESGILLAMAYDRFIAICNPLRYTSVLTNTR---------VVKIGLGVL-MRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLD-YLIIFISYVLILKTVLSIASREERAKALITCVSHICCVLVFYVTVIGLS-----LIHRFGKQVPHIVHLIMSYAYFLF-----PPLMNPITYSVKTKQIQNAILHLFTTHRIGT |
| 2YDV Chain:A ((21-306)) | ------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI------STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVA---CLFEDVVPM--NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQ--------STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222264 for 1821 contacts (-122.1/contact) +
2D Compatibility (PS) -25432 + (NN) -8216 + (LL) 4204
1D Compatibility (HY) -20000 + (ID) 3250
Total energy: -274958.0 ( -150.99 by residue)
QMean score : 0.233
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