Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGKNLTSISECFLLGFSEQLEEQKPLFGSFLFMYLVTVA---GNLLIILVIITDTQLHTPMYFFLANLSLADACFVSTTVPKMLANIQIQSQAISYSGCLLQLYFFMLFVMLEAFLLAVMAYDCYVAICHPLHYILIMSPGLCIFLVSASWIMNALHSLLHTLLMNSLSFCANHEIPHFFCDINPLLSLSCTDPFTNELVIFITGGLTGLICVLCLIISYTNVFSTILKIPSAQGKRKAFSTCSSHLSVVSLFFGTSFCVDFSSPSTHSAQKDTVASVMYTVVTPMLNPFIYSLRNQEIKSSLRKLIWVRKIHSP
3NY8 Chain:A ((40-232))-------------------------WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH---WYRATHQEA-----INCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLK


General information:
TITO was launched using:
RESULT:

Template: 3NY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176274 for 1282 contacts (-137.5/contact) +
2D Compatibility (PS) -19568 + (NN) -9568 + (LL) 2224
1D Compatibility (HY) -15200 + (ID) 2400
Total energy: -220786.0 ( -172.22 by residue)
QMean score : 0.190

(partial model without unconserved sides chains):
PDB file : Tito_3NY8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NY8-query.scw
PDB file : Tito_Scwrl_3NY8.pdb: