Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METKNYSSSTSGFILLGLSSNPKLQKPLFAIFLIMYLLTAVGNVLIILAIYSDPRLHTPMYFFLSNLSFMDICFTTVIVPKMLVNFLSETKIISYVGCLIQMYFFMAFGNTDSYLLASMAIDRLVAICNPLHYDVVMKPWHCLLMLLGSCSISHLHSLFRVLLMSRLSFCASHIIKHFFCDTQP-VLKL----SCSDTSSSQMVVMTETLAVIVTPFLCTIFSYLQII----VTVLRIPSAAGKW---------KAFSTCGSHLTVVVL-----FYGSVIYVYFRPLSMYSVMKGRVATVMYTVVTPMLNPFIYSLRNKDMKRGLKKLRHRIYS |
| 2Y03 Chain:A ((23-298)) | ------------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLF---VAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188753 for 1771 contacts (-106.6/contact) +
2D Compatibility (PS) -24172 + (NN) -3868 + (LL) 4712
1D Compatibility (HY) -23600 + (ID) 3300
Total energy: -238981.0 ( -134.94 by residue)
QMean score : 0.154
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