Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMYFFLTNLSILDL-----CYTTT--TVPH---MLVNIGCNKKTISYAGCVAHLIIFLALGATECLL-LAVMSFDRYVAVCRPLHYVVIMNYWFCLRMA----AFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCEVPALLKLSCA-------DTKPIEAELFFFSVLILLIPVTLILISYGFIAQAVLKIRSAEGRQKAFGTCG------SHMIVVSL---------FYGTAIYMYLQPPSSTSKDWGKM---VSLFYGIITSMLNSLIYSLRNKDMKEAFKRLMPRIFFCKK |
3CAP Chain:A ((44-315)) | --------------------------MFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG-----------FFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF----THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160933 for 1562 contacts (-103.0/contact) +
2D Compatibility (PS) -23394 + (NN) -8237 + (LL) 5504
1D Compatibility (HY) -27200 + (ID) 3350
Total energy: -217610.0 ( -139.31 by residue)
QMean score : 0.150
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