Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIDNQTWVREFILLGLSSDWCTQISLFSLFLVTYLMTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLAL----GGIEFVLLAVMAYDRHVAVSDRLRYSAIMHGGLCARLAITSWVSGSINSLVQTAITFQLPMCTNKFIDHISCELLAVVRLACVDTSSNEAAIMVSSIVLLMTPFCLVLLSYIRII----STILKIQSREGRK---------KAFHTCASHLTVVALCYGTTIFTYIQPHSGPSVLQEKLISVF--YAIVMPLLNPVIYSLRNKEVKGAWHKLLEKFSGLTSKLGT |
2Y03 Chain:A ((6-299)) | ----------------LSQQWEAGMSLLMALVV--LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIE--TLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVW---AISALVSF-----LPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218106 for 1906 contacts (-114.4/contact) +
2D Compatibility (PS) -26929 + (NN) -7665 + (LL) 4108
1D Compatibility (HY) -28400 + (ID) 3700
Total energy: -280692.0 ( -147.27 by residue)
QMean score : 0.223
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