Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSYSIYKSTVNIPLSHGVVHSFCHNMNCNFMHIFKFVLDFNMKNVTEVTLFVLKGFTDNLELQTIFFFLFLAIYLFTLMGNLGLILVVIRDSQLHKPMYYFLSMLSSVDACYSSVITPNMLVDFTTKNKVISFLGCVAQVFLAC---SFGTTECFLLAAMAYDRYVAIYNPLLYSVSMSPRVYMPLINASYVAGILHATIHTVATFSLSF---------------------CGANEIRRVFCDIPPLLAISYSDTHTNQLLLFYFVGSIELVTILIVLISYGLILLAILKMYS----AEGRRKVFSTCGAHLTGVSIYYGTI-----------LFMYVRPSSSYASDHDMIVSIFYTIVIPLLNPVIYSLRNKDVKDSMKKMFGKNQVINKVYFHTKK
2YDO Chain:A ((7-302))---------------------------------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFV-----VSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYN---------GLVTGTRAKGII--AICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPM----------NYMVYFNFFACV-LVPLLLMLGVYLRIFLAARRQLKQMES------TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAA


General information:
TITO was launched using:
RESULT:

Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -244765 for 1845 contacts (-132.7/contact) +
2D Compatibility (PS) -24774 + (NN) -5282 + (LL) 7056
1D Compatibility (HY) -27600 + (ID) 3250
Total energy: -298615.0 ( -161.85 by residue)
QMean score : 0.231

(partial model without unconserved sides chains):
PDB file : Tito_2YDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDO-query.scw
PDB file : Tito_Scwrl_2YDO.pdb: