Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGPRNQTAVSEFLLMKVTEDPELKLIPFSLFLSMYLVTILGNLLILLAVISDSHLHTPMYFLLFNLSFTDICLTTTTVPKILVNIQAQNQSITYTGCLTQICLVLVFAGLESCFLAVMAYDRYVAICHPLRYTVLMNVHFWGLLILLSMFMSTMDALVQSLMVLQLSFCKNVEIPLFFCEVVQVIKLAC--SDTLINNILIYFASSVFGAIPLSGIIFSYSQIVTSVLR---------MPSARGK----------------YKAFSTCGCHLSVFSLFYGTAFGVYISSAVAESSRITAVASVMYTVVPQMMNPFIYSLRNKEMKKALRKLIGRLFPF |
3UZA Chain:A ((14-303)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACH-GCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQV---ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCF--TFFCPDCSHAPLWLMYLAIVLAHTNSVV----NPFIYAYRIREFRQTFRKIIRS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -245734 for 1915 contacts (-128.3/contact) +
2D Compatibility (PS) -25499 + (NN) 1263 + (LL) 4148
1D Compatibility (HY) -22400 + (ID) 3800
Total energy: -292022.0 ( -152.49 by residue)
QMean score : 0.267
|
|
|