Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATALPPRLQPVRGNETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIAIWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLR--EGSMFVA------LGASTCSLLAIAIERHLTM-IKMRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWN-----------CLHNLPDC--STILPLYSKKYIAFCISIFTAILVTIVIL---YARIYFLVKSSSRKVANHN-NSERSMALL-------RTVVIVVSVFIACWSPLFILFLIDVACRVQACPILFKAQ-WFIVLAVL----NSAMNPVIYTLASKEMRRAFFRLVCNCLVRGRGARASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMDKNAALQNGIFCN |
| 4UHR Chain:A ((6-303)) | --------------------------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVL---------AIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFNF----FACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHI-----INCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202326 for 1844 contacts (-109.7/contact) +
2D Compatibility (PS) -26550 + (NN) -14790 + (LL) 5032
1D Compatibility (HY) -28000 + (ID) 4000
Total energy: -270634.0 ( -146.76 by residue)
QMean score : 0.246
|
|
|