Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNE-HGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLSL-----PGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDYGQLGVQALENQATGQGICIAFKDIMPFSAQVGDERMQ----CLMRHLAQA-GATVVVVFSSRQLARVFFESVVLTNLTGKVWVASEAWALSRHITGVPGIQRIGMVLGVAIQKRAVPGLKAFEEAYARADKKAPRPCHKGSW----------CS---SNQLCRECQAFMAHTMPKLKAFSMSSAYNAYRAVYAVAHGLHQL----------LGCASGACSRGRVYPWQLLEQIHKVHFLLHKDT---VAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSDLYRCQPCGKEEWAPEGSQTCFPRTVVFLALREHTSWVLLAANTLLLLLLLGTAGLFAWHLDTPVVRSAGGRLCFLMLGSLAAGSGSLYGFFGEPTRPACLLRQALFALGFTIFLSCLTVRSFQLIIIFKFSTKVPTFYHAWVQNHGAGLFVMISSAAQLLICLTWLVVWTPLPAREYQRFPHLVMLECTETNSLGFILAFLYNGLLSISAFACSYLGKDLPENYNEAKCVTFSLLFNFVSWIAFFTTASVYDGKYLPAANMMAGLSSLSSGFGGYFLPKCYVILCRPDLNSTEHFQASIQDYTRRCGST |
| 5CNM Chain:A ((34-497)) | ------------------------------EIKIEGDLVLGGLFPINEKGTGTEE------CGR---INEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCS--RDTYALEQSLEFVRASL---------IPLL-----IAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNISIA------TAEKVG---IRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASF-TWVASDGWGAQESI--IKGSEHVA--YGAITLELASQPVRQFDRYFQSLN---PYNNHRNPWFRDFWEQKFQCSLQN---HRRVCDKHLAIDSSNYE--QESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAMKILDGKKLYKDYLLKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQ------SYLKVGH--WAET-LSLDVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -341006 for 3372 contacts (-101.1/contact) +
2D Compatibility (PS) -41914 + (NN) -11758 + (LL) 30052
1D Compatibility (HY) -24800 + (ID) 6350
Total energy: -395776.0 ( -117.37 by residue)
QMean score : 0.486
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