Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLE----DLVATGTIGTLLSAM----GVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTK-EWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQRPKGYRKL-LALGTWLLALLLTLPVMLAMRL-VRRGPKSLCLPAWGPRAHRAYLTLLFATSIAG---PGLLIGLLYARLARA--YRRSQ--------------------------------------RASFKRARRPGAR-ALRLVLGIVLLFWACFLPFWLWQLLA-----QYHQAPLAPRTARIVNYLTTCLTYG----NSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
| 4XNV Chain:A ((38-382)) | ----------------------------------------------SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRV--YATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210804 for 1927 contacts (-109.4/contact) +
2D Compatibility (PS) -28670 + (NN) -12396 + (LL) 1476
1D Compatibility (HY) -29600 + (ID) 3850
Total energy: -283844.0 ( -147.30 by residue)
QMean score : 0.266
|
|
|