Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNYKSRPTQTCTDEWKKKVSESYVITIERLEDDLQIKEKELTELRNIFGSDEAFSKVNLNYRTENGLSLLHLCCICGGKKSHIRTLMLKGLRPSRLTRNGFTALHLAVYKDNAELITSLLHSGADIQQVGYGGLTALHIATIAGHLEAADVLLQHGANVNIQDAVFFTPLHIAAYYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEEGSKADVNAQDNEDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHLACYNGKFEVAKEIIQISGTESLTKENIFSETAFHSACTYGKSIDLVKFLLDQNVININHQGRDGHTGLHSACYHGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRPQDELPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADILLLRAGLPSHFHLQLSEIEFHEIIGSGSFGKVYKGRCRNK--IVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHE-QKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGN--LRWMAPEVFTQCTRYTIKADVFSYALCLWEILT-GEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKP------ISSLLIRGWNACPEGRPEFSEVVMKLEECLCNIELMSPASSNSSGSLSPSSSSDCLVNRGGPGRSHVAALRSRFELEYALNARSYAALSQSAGQYSSQGLSLEEMKRSLQYTPIDKYGYVSDPMSSMHFHSCRNSSSFEDSS |
4CSV Chain:A ((6-265)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WEIPRSEITLERKLGSGQFGEVYEGKWRNYNIEVAVKTLKEGTM----SVEEFLQEAQIMKKLKHPNLVQLYGVCTKEPPIY-IITEYMSHGSLLDYLRDC----VNAQALLDMAAQVASGMAYLE--SQNFIHRDLAARNCLVGENNVVKVADFG-------------------FPIKWTAPEAISY-NRFSIKSDVWAFGILLWEIFTYGQVPY----PGMSGSEVIEQVER---GYRMPRPQGCPEEIYELMLQCWNKSPEERPTFAETLHALETMFL--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194700 for 1756 contacts (-110.9/contact) +
2D Compatibility (PS) -24296 + (NN) -18409 + (LL) 34792
1D Compatibility (HY) -22000 + (ID) 4650
Total energy: -229263.0 ( -130.56 by residue)
QMean score : 0.409
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