Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------AVTCGDVTSAVAPCMSYATGKASAPSGACCSGVR--TLNAKASTPADRKAACNCLKNLAGSGISMG-NAANIPGKCGV----SVSFPISTKTNCNNLH----------------
2POL Chain:A ((245-366))RRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL


General information:
TITO was launched using:
RESULT:

Template: 2POL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35251 for 617 contacts (-57.1/contact) +
2D Compatibility (PS) -9065 + (NN) 3755 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -43861.0 ( -71.09 by residue)
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_2POL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2POL-query.scw
PDB file : Tito_Scwrl_2POL.pdb: