Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------ISCSTVYST--LMPCPQYVQQGGSP----------------------ARGCCTGIQNLLAEANNSPDRRTICGCLKNVA-NGASGGPYITRAAALPSKCNVALPYKISPSVDCNSIH
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN-------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21849 for 624 contacts (-35.0/contact) +
2D Compatibility (PS) -7986 + (NN) 5876 + (LL) 312
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -26397.0 ( -42.30 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: